BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E03LP1|AL425869
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1534 0.0
>3x_Contig1486
Length = 12131
Score = 1534 bits (773), Expect = 0.0
Identities = 779/781 (99%)
Strand = Plus / Plus
Query: 22 gaaaacgttgtgctaccccaacttttcaaacaactatgcatacatccactaactcacccc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4253 gaaaacgttgtgctaccccaacttttcaaacaactatgcatacatccactaactcacccc 4312
Query: 82 aaattggtttattctacaatactcgtattctcgagatacacagaatggaccagtaaacat 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4313 aaattggtttattctacaatactcgtattctcgagatacacagaatggaccagtaaacat 4372
Query: 142 gaggatctactggaaatccaattgaattatatattcaatggatttgaagcaggccaatca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4373 gaggatctactggaaatccaattgaattatatattcaatggatttgaagcaggccaatca 4432
Query: 202 aatcatgatctctctgttgctgcctccaatgcattaatgtatttctgtcaggactgctcg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4433 aatcatgatctctctgttgctgcctccaatgcattaatgtatttctgtcaggactgctcg 4492
Query: 262 tcacttcttgttaattattgtggccagttagtggattttatttggaaaattgaacgcgca 321
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4493 tcacttcttgttaattattgtggccagttagtggatttcatttggaaaattgaacgcgca 4552
Query: 322 gttgacaactactctatgtttgagatgtgtcaaggcttaagttctgtcataaatgagcag 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4553 gttgacaactactctatgtttgagatgtgtcaaggcttaagttctgtcataaatgagcag 4612
Query: 382 gaaacagcgaagattggtggcatattcaattcattcacctcccaacataataagaggttt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4613 gaaacagcgaagattggtggcatattcaattcattcacctcccaacataataagaggttt 4672
Query: 442 gacattatcattcagcaattcatctcgaacccatctgatcctgatctttctgcaaaagtt 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 gacattatcattcagcaattcatctcgaacccatctgatcctgatctttctgcaaaagtt 4732
Query: 502 gcacactatattgatttgctttatgcaattttggggaacattgtccccaaattcgagtat 561
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4733 gcacactatattgatttgctttatgcaattttggagaacattgtccccaaattcgagtat 4792
Query: 562 ccagaacaaggtgttgaagaaccgttaattgcctctatttccgaacatattacaaagtta 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4793 ccagaacaaggtgttgaagaaccgttaattgcctctatttccgaacatattacaaagtta 4852
Query: 622 attaacttattggacgcatatgcgatctctaatgttatcattgtcgatagaacaatgaaa 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4853 attaacttattggacgcatatgcgatctctaatgttatcattgtcgatagaacaatgaaa 4912
Query: 682 ttcttccgtcgtgttttcgaaaaataccacctattcacacaaccaatacttccggcggtc 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4913 ttcttccgtcgtgttttcgaaaaataccacctattcacacaaccaatacttccggcggtc 4972
Query: 742 tcagaatttgtggctaaaggttattcaacaagtggtctaggagcgtatttgtggttctct 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 tcagaatttgtggctaaaggttattcaacaagtggtctaggagcgtatttgtggttctct 5032
Query: 802 g 802
|
Sbjct: 5033 g 5033
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6071
Number of Sequences: 1807
Number of extensions: 6071
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)